Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902520.1_cds_XP_016452564.1_46792
CDS Infomation

[gene=LOC107777096] [db_xref=GeneID:107777096] [protein=ribosome biogenesis protein BMS1 homolog] [protein_id=XP_016452564.1] [location=join(8088..8222,8366..8512,8600..8690,9012..9130,9817..10007,10112..10322,11705..11945,13168..13607,14111..14237,14434..14636,15213..15562,15731..15830,15908..16126,16323..16562,18106..18333)] [gbkey=CDS]
Sequence

ATGGCTATGGATGGAGAACAGTCACACAAATCTCACAGGTCACGTCAATCTGGTCCCACC
GCCAAGAAAAAATCAAAGTCCGATAAGAAAAAGAAAGGTGCTTCCGACGAAAATCAAAAG
CAACATAACCCTAAGGCATTTGCATTTAATTCGACGGTGAAAGCAAAGAAATTGCAAGCA
CGAGATACAGAGAAGGAACAGAAGAGGCTTCATGTCCCAACGATTGATCGGTCCACTGGA
GAACCAGCTCCATATGTAATTGTAGTGCAGGGACCTCCCAAGGTTGGGAAGTCACTGCTA
ATTAAGACTCTTGTGAAGCATTACACTAAGCAAAATTTACCCGAAGTTCGAGGTCCCATC
ACTATAGTGTCAGGTAAGCAGAGACGTTTGCAGTTTATAGAGTGTCCAAATGATATCAAT
GGAATGATTGATGTGGCAAAGTTTGCGGATTTGGCATTACTTCTCATTGATGGTAGCTAT
GGCTTTGAAATGGAGACCTTTGAATTCCTTAACATAATGCAAAATCATGGATTTCCTAAA
GTTATGGGTGTTCTTACACATCTCGACCAGTTCAAGGATGTTAAGAAGCTTAAAAAGACA
AAGCAACGGTTAAAGCATAGATTCTGGACTGAGATATATGACGGAGCTAAATTATTTTAT
TTGTCTGGTCTTATCCATGGAAAGTACTCTAAACGTGAAGTGCATAATCTTGCGCGGTTT
ATCTCTGTCATGAAGTTTCCTCCTTTGTCCTGGCGCATGTCCCATCCTTACATTGTTGTA
GATCGATTTGAAGATGTAACTCCTCCCGAAAAAGTGCGCATGGACAGCAAGTGTGACAGA
AATATCATTCTGTACGGTTATCTTCGTGGATGTAATTTGATGAAAGGAGCAAAGGTGCAT
ATTGCTGGTGTTGGTGATTATAGTTTGGCTGGTATAACAGCGTTAGCTGATCCGTGCCCT
CTACCATCTGCTGCCAAGAAGAAGGGGCTAAGGGACAAGGAAAAGCTGTTTTATGCCCCC
ATGTCGGGATTGGGCGATCTTCTCTACGATAAGGATGCTGTGTATATAAACATAAATGAT
CACTTTGTCCAGTTCTCTAAGGTTGATGAAACAGCTGCTGTTGGGGCTCGCAACGGGAAG
GACAACGATATTGGCGAGGTTTTAGTTAAATCACTTCAGAACACAAAATATTCGATTGAT
GAGAAGTTAGAAAATAGTTTTATTTCCCTTTTTGGGAAAAAACCTATTCTTTCCTCAGCA
AATCCTGAAGCTGATCAAACTTATGGTTTGGAGCCTGCGGAGCGAGATCAGTCTGGGTTA
GAACTCAACAGCGGGGAATCAGATAAAGACGATGATGTTGAAGATTTGAATGAGTTGGAA
CAACTACAGTTAGAGGGAACTCATTCAAGGGATTCAAAGAAGAGAACTTCCGATGATAGC
TCGGAGGAAGAAAATACTATTGGATCAGAGAAGCACCCAGGATCCAGTAGTAGTTTCAGG
GAACTTGTTGATTTCCATGATGGAAGGATGAGAAGAAAAGCTATCTTTGATGATGATAAT
GACTTTGATGAAAAGGATTATAATGAAGAAGATGACGACGAGGATGAACAGGACGAGGAA
GCACAAGATGATATAGAGGACACTGATGAGGAAAATGAAGCTTATCAAAATTCTGGGGAA
GATGATGATTTCGATACAGATGTTGGAGAGGACATGGGCAATGCTTCAAGATGGAAAGAG
TTCCTGTCAGAAAGGACACGTGAGCGCCAAAATGTTAATCTTATGCAGCTTGTATATGGG
GAAACTGAATCCAAGTCAATTACTAAAGCTGGGTTGCAGCAGCGTGGCACTGAAAACGAT
GATAGTGATACTGAGTTCTTCGTGCCAAAAGGGGAAGGAACTAAGAAACCAGAAGAGCGG
GTGAATGATGATAATATTGATGCCGAGGACTGCTCCAAATTTGTAAATTTTGCAAGTCAA
AGTGACTGGAAGAGCCAAGAATCCATTGAAAGCATCCGTAGTCATTTTGTCAGCAAAGGC
TGGTCCAAAGCGGCTCGTGGAGGCAGCTCAAGAGATGTTGATGGTAATGATGATGCTGGT
GAGGATGGCGAGGATCTGTTTGGTGATTTTGAAGACTTGGAAACAGGTCAGAAGTATGAT
ACTGGAACTGGTGACATGATCCATAGGGATGATGAATCAGCAAATGAGGAGCGTAGGCTA
AAGAAATTAGCACTTCGTGCAAAATTTGATAATCAATATGGTGGGTCTGATTCCTCCAAT
GAGGAGGATGAGGATATCAAACCAGACACAGAGTCTCATCGGGGTCAAGCTGATGGAAAC
GGCTACTATGATAAGTTGAAGGAGGAGGTAGAGCTTCGGAAACAAGTTAATTTAGCAGCA
CTGAATGAACTTGATGAGGACACTCGGGTAGAGGTAGAAGGTTTCAGAACAGGAACTTAT
CTTAGACTAGAAGTGCATGATGTCCCCTCTGAGATGGTCGAATATTTTGATCCTTGCCAT
CCTATTCTTGTTGGAGGTCTAGCACTTGGGGAAGAAAATGTTGGATACATGCAGGTTCGG
CTGAAGCGTCATAGGTGGCACAAGAAAGTGCTGAAGACTAGGGATCCAATTATTGTTTCT
ATTGGATGGAGGCGCTACCAAACTGTACCTATTTATGCTATTGAGGACCAAAATGGTCGT
CATCGTATGCTCAAGTACACTCCTGAGCACATGCATTGCCTGGCAATGTTTTGGGGTCCT
CTTGTGCCTCCACACACTGGAATGATCGCTGTTCAAAACTTGTCAAACAATCAGGCATCC
TTTAGAATCACTGCCACTGCAACTGTGCTAGAGTTCAACCATGCAGCACGAATAGTCAAA
AAGATCAAGTTAGTTGGTTACCCATGTAAGATATTCAAGAAGACAGCACTTATCAAGGAC
ATGTTCACTTCAGATCTTGAAATAGCTAGGTTTCAAGGTGCAGCTGTTCGAACTGTTAGT
GGAATTCGTGGGCAAGTGAAAAAGGTAGTTTCCTACTCTTGA

Peptide Sequence

PEP ID

XP_016452564.1
PEP Infomation

PREDICTED: ribosome biogenesis protein BMS1 homolog [Nicotiana tabacum]
Sequence

MAMDGEQSHKSHRSRQSGPTAKKKSKSDKKKKGASDENQKQHNPKAFAFNSTVKAKKLQA
RDTEKEQKRLHVPTIDRSTGEPAPYVIVVQGPPKVGKSLLIKTLVKHYTKQNLPEVRGPI
TIVSGKQRRLQFIECPNDINGMIDVAKFADLALLLIDGSYGFEMETFEFLNIMQNHGFPK
VMGVLTHLDQFKDVKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYSKREVHNLARF
ISVMKFPPLSWRMSHPYIVVDRFEDVTPPEKVRMDSKCDRNIILYGYLRGCNLMKGAKVH
IAGVGDYSLAGITALADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYININD
HFVQFSKVDETAAVGARNGKDNDIGEVLVKSLQNTKYSIDEKLENSFISLFGKKPILSSA
NPEADQTYGLEPAERDQSGLELNSGESDKDDDVEDLNELEQLQLEGTHSRDSKKRTSDDS
SEEENTIGSEKHPGSSSSFRELVDFHDGRMRRKAIFDDDNDFDEKDYNEEDDDEDEQDEE
AQDDIEDTDEENEAYQNSGEDDDFDTDVGEDMGNASRWKEFLSERTRERQNVNLMQLVYG
ETESKSITKAGLQQRGTENDDSDTEFFVPKGEGTKKPEERVNDDNIDAEDCSKFVNFASQ
SDWKSQESIESIRSHFVSKGWSKAARGGSSRDVDGNDDAGEDGEDLFGDFEDLETGQKYD
TGTGDMIHRDDESANEERRLKKLALRAKFDNQYGGSDSSNEEDEDIKPDTESHRGQADGN
GYYDKLKEEVELRKQVNLAALNELDEDTRVEVEGFRTGTYLRLEVHDVPSEMVEYFDPCH
PILVGGLALGEENVGYMQVRLKRHRWHKKVLKTRDPIIVSIGWRRYQTVPIYAIEDQNGR
HRMLKYTPEHMHCLAMFWGPLVPPHTGMIAVQNLSNNQASFRITATATVLEFNHAARIVK
KIKLVGYPCKIFKKTALIKDMFTSDLEIARFQGAAVRTVSGIRGQVKKVVSYS

Transcript Sequence

Gene sequence data has not been registered.